Detect the type of DNA damage with FLARETM Assays
The FLARETM Assay (Fragment Length Analysis using Repair Enzymes) provides the ability to detect DNA damage in single cells using a variety of DNA repair enzymes in conjunction with CometAssayTM single cell gel electrophoresis kit. To assess the type of DNA damage induced by a putative mutagen, drug, or treatment regimen, cells are harvested after treatment and immobilized in a layer of low melting point agarose on the FLARE Slide.
The cells are gently lysed and subsequently incubated with a kit-specific enzyme
which recognizes a particular type of DNA damage (see below) and cleaves the
DNA. After treatment with alkali to denature the DNA, the samples are submitted
to neutral gel electrophoresis, and stained using SYBR(r) Green I.
Denatured, cleaved DNA fragments migrate out of the cell during electrophoresis,
while undamaged, supercoiled DNA remains within the confines of the nuclear cell
membrane. The extent of the DNA damage can be assessed qualitatively, or
quantitatively using image analysis software to calculate tail length and tail
moment.
Features:
- FLARE Slides allow direct application of low melting point agarose without base
layers or pretreatment for three samples
- Hydrophobic barrier allows easy application of cells directly to slide and
treatment with enzyme
- Base specific DNA damage detection in a convenient format
Available reagents:
- Kits (-FK) provide the enzyme, reagents, and FLARE slides for 75 samples
- Modules (-FM) provide enzyme and reagents for >100 samples
FLARE Assays:
|
Catalog # |
Assay Type |
Damage Recognized |
Damage |
4040-100-FK
4040-100-FM
|
E.coli Fpg |
8-oxoguanine, DNA containing formamidopyrimidine moieties |
Oxidative Damage |
4045-01K-FK
4045-01K-FM |
E.coli
Endonuclease III |
Thymine Glycol, 5,6-dihydrothymine, urea, 5-hydroxy-6-hydrothymine,
5,6-dihydrouracil, alloxan, 5-hydroxy-6-hydrouracil, uracil glycol,
5-hydroxy-5-methylhydantoin,
5-hydroxycytosine,5-hydroxyuracil, methyltartonylurea, thymine ring saturated or
fragmentation product |
4130-100-FK
4130-100-FM
|
Human OGG1 |
8-oxoguanine, DNA containing formamidopyrimidine moieties |
4055-100-FK
4055-100-FM
|
T4-PDG |
Cis-syn isomers of cyclobutane pyrimidine dimers |
UV Damage |
4065-100-FK
4065-100-FM
|
Chorella virus-PDG |
Cis-syn and trans-syn isomers of cyclobutane pyrimidine dimers |
4100-100-FK
4100-100-FM
|
S. pombe
UVDE |
CyclobuCyclobutane pyrimidine dimers, (6-4) photoproducts |
Other consumables
FLARE, CometAssay and CometSlide are trademarks of Trevigen, Inc.